Mar 10 2023

T19-2023 Notification regarding BIOVIA Pipeline Pilot Chemistry Collection and SDK 2023 SP1

BIOVIA Pipeline Pilot Chemistry Collection and SDK

Technical Note T19-2023

March 2023

Notification regarding BIOVIA Pipeline Pilot Chemistry Collection and SDK 2023 SP1

Program

BIOVIA Pipeline Pilot Chemistry Collection and SDK

Operating System

All supported operating systems

Description

We are providing this Technical Note to inform you about the release of BIOVIA Pipeline Pilot Chemistry Collection and SDK 2023 SP1 which includes the following enhancements and fixed defects:

Enhancements

This release of BIOVIA Pipeline Pilot Chemistry Collection and SDK includes the following enhancements.

Description

Areas Affected

Risk Level

Jira Issue ID

Added support for Microsoft Edge Chromium based WebView2 control used by Insight For Excel. This replaces IE-11 based WebBrowser component.

PCHE: Sketchers

Low

PCHE-8752

Qt Windows libraries are upgraded to version 5.15.10.

PCHE: Chemistry Depiction

Low

PCHE-8755

Fixed Defects

This release of BIOVIA Pipeline Pilot Chemistry Collection and SDK includes the following fixed defects.

Severity

Description

Areas Affected

Risk

Defect

Critical

The CalcPciture.calcPicture method of Java PPChem SDK no longer crashes when generating PNG images in multiple threading mode in Linux.

PCHE: Chemistry Depiction

Low

PCHE-8633

Major

Fixed parsing of SMARTS queries that contain two atoms that can be aromatic or aliphatic and are connected by a '~' (any) bond, for example [A,a]~[A,a].

PCHE: Chemical Perception, PCHE: File Formats

Low

PCHE-8721

Major

Enabled the launch of Pipette from Pipeline Pilot client to draw molecule as input for the following components.

·         Align Molecule using Substructure

·         Exact Structure Filter

·         Exact Structure Map

·         Substructure Count

·         Substructure Filter

·         Substructure Map

PCHE: Sketchers

Low

PCHE-8754

Major

Made several enhancements for chemical perception and enumeration:

·         Replaced the SMIRKS definition of the InChI2 transforms by individual rxn files for each rule.

·         Set default value for Maximum Number of Tautomers in Enumerate Tautomers (InChI2 Transforms) component to 1000.

·         Added new parameter to Enumerate Tautomers (InChI2 Transforms), MaxNum Successive Transforms Per Molecule, Maximum number of successive tautomer transformations that can be applied to each input molecule. Leave empty to allow an unlimited number of transformations. The default value is set to 3.

·         Added new parameters to the PPChem SDK API to generate tautomers GenerateInchi2Tautomers(Molecule mol, int maxNumTautomers, int maxSuccessiveTransforms, bool doPT, bool doRC, bool doVT). Note that the new argument requires 2023 PPChem SDK code that uses this API to be updated.

·         Fixed handling of Maximum Number of Tautomers to make sure the enumeration stops when the maximum is reached.

·         Modified Get InChI2 Tautomers from SMILES to work with both All Tautomers and Canonical Tautomer options.

PCHE: Chemical Perception, PCHE: Enumeration

Low

PCHE-8756

 

Resolution                                                                         

BIOVIA Pipeline Pilot Chemistry Collection and SDK 2023 SP1 was released in March 2023 and is available for download at https://software.3ds.com under BIOVIA products and can be found under:

Product line: Lab, Scientific and Content Solutions

Release: BIOVIA 2023

Level: BIOVIA 2023 Refresh1

How to contact BIOVIA Support

If you have any questions, please contact BIOVIA Support.